When the connection will not come up
The five failures that account for almost every case.
Work through these in order. The first two cover most of it.
1. Claude Desktop was not restarted
The config is read once at launch. A correct setup plus a running app equals no tools.
Quit Claude Desktop fully and reopen it. In Claude Code, claude mcp list re-checks
health live, so there is nothing to restart.
2. The key is not reaching the server
Check the server is actually up first:
A healthy server answers with a small JSON object that includes "auth":"required". If
that works but tools do not, the key is the problem, not the network. An unauthenticated
call is refused outright:
That returns an unauthorized error by design. Add your header and it should return the tool list:
If the header version still fails, the key is wrong, revoked, or was pasted with a trailing newline. Re-copy it.
3. The shop is not in scope
A key is bound to the shops it may act on. Calling a tool with a different shop_id is
refused even though the key is valid, which reads like a broken connection but is the
scope check doing its job. Confirm you are passing the exact domain the key was issued
for, in full your-store.myshopify.com form rather than just the store name.
4. Claude can see the tools but never uses them
Usually the request is too vague. Name the server and the job:
Using the gemboss MCP server, run a capture digest for https://example.com.
If it still refuses, ask it to list the tools it can see. A short or empty list means the connection, not the wording.
5. Two servers, two keys
The build tools (gem.*, gemtheme.*) and the read-only analytics tools (gemboss.*) are
different servers. A key for one will not authenticate the other. If half the tools work
and half do not, this is why.
Still stuck
Send us the shop domain, which client you are using, and what
claude mcp list prints. Never send the key itself.
Still stuck?
If none of the five above is it, tell us what the browser step did and we will look.
Talk to us →Thanks. That goes straight to the people who write these.